Pseudomonas mendocina NK-01, MDS_1819
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pmk02040 | Flagellar assembly | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13861 | FlgD Tudor-like domain | IPR025963 | FlgD Tudor-like domain | 83 | 217 | 2.0E-17 |
| Gene3D | G3DSA:2.60.40.4070 | - | - | - | 100 | 186 | 5.4E-45 |
| Pfam | PF03963 | Flagellar hook capping protein - N-terminal region | IPR005648 | Flagellar hook capping protein | 12 | 74 | 1.4E-22 |
| Gene3D | G3DSA:2.30.30.910 | - | - | - | 84 | 214 | 5.4E-45 |
| Pfam | PF13860 | FlgD Ig-like domain | IPR025965 | FlgD/Vpr, Ig-like domain | 106 | 177 | 3.3E-22 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.