Pseudomonas mendocina NK-01, MDS_1853

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003774 motor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019404
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019404
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF019404
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071973 bacterial-type flagellum-dependent cell motility
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02473
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0009288 bacterial-type flagellum
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02473
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pmk02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01004 Flagellar FliJ protein signature IPR018006 Flagellar FliJ, proteobacteria 6 28 2.3E-10
Pfam PF02050 Flagellar FliJ protein IPR012823 Flagellar export FliJ 22 143 5.0E-36
Gene3D G3DSA:1.10.287.1700 - - - 2 146 6.4E-35
PIRSF PIRSF019404 FliJ IPR018006 Flagellar FliJ, proteobacteria 3 148 9.6E-39
PANTHER PTHR38786 FLAGELLAR FLIJ PROTEIN - - 6 146 2.2E-40
PRINTS PR01004 Flagellar FliJ protein signature IPR018006 Flagellar FliJ, proteobacteria 65 86 2.3E-10
PRINTS PR01004 Flagellar FliJ protein signature IPR018006 Flagellar FliJ, proteobacteria 46 63 2.3E-10
PRINTS PR01004 Flagellar FliJ protein signature IPR018006 Flagellar FliJ, proteobacteria 128 148 2.3E-10
Coils Coil Coil - - 110 130 -
PRINTS PR01004 Flagellar FliJ protein signature IPR018006 Flagellar FliJ, proteobacteria 110 128 2.3E-10
NCBIfam TIGR02473 JCVI: flagellar export protein FliJ IPR012823 Flagellar export FliJ 7 145 9.1E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.