Pseudomonas mendocina NK-01, MDS_2963

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF63411
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004222 metalloendopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008270 zinc ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0018189 pyrroloquinoline quinone biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02110
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.830.10 - - - 3 225 6.8E-51
SUPERFAMILY SSF63411 LuxS/MPP-like metallohydrolase IPR011249 Metalloenzyme, LuxS/M16 peptidase-like 7 217 2.2E-38
NCBIfam TIGR02110 JCVI: pyrroloquinoline quinone biosynthesis protein PqqF IPR011844 Coenzyme PQQ biosynthesis protein PqqF 11 700 0.0
SUPERFAMILY SSF63411 LuxS/MPP-like metallohydrolase IPR011249 Metalloenzyme, LuxS/M16 peptidase-like 610 787 6.47E-28
Coils Coil Coil - - 719 739 -
Pfam PF05193 Peptidase M16 inactive domain IPR007863 Peptidase M16, C-terminal 177 284 3.4E-6
Pfam PF00675 Insulinase (Peptidase family M16) IPR011765 Peptidase M16, N-terminal 20 139 1.0E-25
PANTHER PTHR43690 NARDILYSIN - - 640 769 6.2E-52
Gene3D G3DSA:3.30.830.10 - - - 609 787 5.1E-23

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.