Pseudomonas mendocina NK-01, MDS_3168
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.40.160.50 | 196 | 570 | 3.4E-86 | |||
| Pfam | PF03865 | Haemolysin secretion/activation protein ShlB/FhaC/HecB | IPR005565 | Haemolysin activator HlyB, C-terminal | 223 | 519 | 9.2E-35 |
| Pfam | PF08479 | POTRA domain, ShlB-type | IPR013686 | Polypeptide-transport-associated, ShlB-type | 82 | 156 | 1.3E-18 |
| Gene3D | G3DSA:3.10.20.310 | 69 | 156 | 4.9E-15 | |||
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 76 | - |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.