Pseudomonas mendocina NK-01, MDS_3426

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016746 transferase activity, transferring acyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00563
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF69593 Glycerol-3-phosphate (1)-acyltransferase - - 384 611 5.23E-28
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 14 425 1.7E-19
CDD cd07989 LPLAT_AGPAT-like - - 429 617 1.03444E-43
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 20 386 1.1E-11
Pfam PF01553 Acyltransferase IPR002123 Phospholipid/glycerol acyltransferase 443 570 2.3E-20
CDD cd06173 MFS_MefA_like - - 15 416 5.09601E-47
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 11 419 1.7E-19
SMART SM00563 plsc_2 IPR002123 Phospholipid/glycerol acyltransferase 457 573 3.1E-25
PANTHER PTHR43266 MACROLIDE-EFFLUX PROTEIN - - 9 422 6.1E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.