Pseudomonas mendocina NK-01, MDS_3741

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_3741
Name
Replicon	chromosome
Genomic location	4117006 - 4117482 (- strand)

Cross-References

RefSeq	YP_004381524.1
GI	330504655
Entrez	10458523
INSDC	AEB59772.1
NCBI Locus Tag	MDS_3741
UniParc	UPI000206DEB5
UniProtKB Acc	F4DU84
UniProtKB ID	F4DU84_PSEMN
UniRef100	UniRef100_F4DU84
UniRef50	UniRef50_Q3A8R6
UniRef90	UniRef90_A4XXV3

Product

Feature Type	CDS
Coding Frame	1
Product Name	CMP/dCMP deaminase zinc-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.10
Kyte-Doolittle Hydrophobicity Value	0.064
Molecular Weight (kDa)	17049.5
Isoelectric Point (pI)	8.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 618 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001914 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_3741 Search term: CMP/dCMP deaminase zinc-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000237283 adenosine deaminase tRNA specific 2 [Source:HGNC Symbol;Acc:HGNC:21172] E-value: 3.7e-09 Percent Identity: 31.8

References