Pseudomonas mendocina NK-01, MDS_4144

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00455	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR30328	TRANSCRIPTIONAL REPRESSOR	-	-	18	222	1.8E-70
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	17	88	5.64E-18
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	52	75	4.4E-7
Gene3D	G3DSA:1.10.357.10	Tetracycline Repressor, domain 2	-	-	27	223	1.5E-62
SUPERFAMILY	SSF48498	Tetracyclin repressor-like, C-terminal domain	IPR036271	Tetracyclin repressor-like, C-terminal domain superfamily	97	222	8.01E-34
Pfam	PF00440	Bacterial regulatory proteins, tetR family	IPR001647	DNA-binding HTH domain, TetR-type	31	77	4.1E-14
Pfam	PF17938	Tetracyclin repressor-like, C-terminal domain	IPR041474	HTH-type transcriptional repressor NicS, C-terminal	99	217	4.1E-47
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	31	44	4.4E-7

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.