Pseudomonas mendocina NK-01, MDS_4752

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01302	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009306	protein secretion	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01302	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pmk02040	Flagellar assembly	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00951	Flagellar biosynthetic protein FliP signature	IPR005837	Flagellar transport protein FliP	169	181	6.9E-13
PRINTS	PR01302	Type III secretion system inner membrane P protein family signature	IPR005838	Type III secretion system inner membrane P protein	221	246	1.6E-65
PRINTS	PR01302	Type III secretion system inner membrane P protein family signature	IPR005838	Type III secretion system inner membrane P protein	49	68	1.6E-65
PRINTS	PR01302	Type III secretion system inner membrane P protein family signature	IPR005838	Type III secretion system inner membrane P protein	197	218	1.6E-65
PRINTS	PR00951	Flagellar biosynthetic protein FliP signature	IPR005837	Flagellar transport protein FliP	47	56	6.9E-13
PRINTS	PR01302	Type III secretion system inner membrane P protein family signature	IPR005838	Type III secretion system inner membrane P protein	68	88	1.6E-65
PRINTS	PR01302	Type III secretion system inner membrane P protein family signature	IPR005838	Type III secretion system inner membrane P protein	176	196	1.6E-65
Pfam	PF00813	FliP family	IPR005838	Type III secretion system inner membrane P protein	51	243	2.9E-73
PRINTS	PR01302	Type III secretion system inner membrane P protein family signature	IPR005838	Type III secretion system inner membrane P protein	88	107	1.6E-65
PRINTS	PR00951	Flagellar biosynthetic protein FliP signature	IPR005837	Flagellar transport protein FliP	119	133	6.9E-13
PANTHER	PTHR30587	FLAGELLAR BIOSYNTHETIC PROTEIN FLIP	IPR005838	Type III secretion system inner membrane P protein	31	248	1.5E-85
NCBIfam	TIGR01103	JCVI: flagellar type III secretion system pore protein FliP	IPR005837	Flagellar transport protein FliP	51	246	6.1E-75
PRINTS	PR00951	Flagellar biosynthetic protein FliP signature	IPR005837	Flagellar transport protein FliP	237	247	6.9E-13
PRINTS	PR00951	Flagellar biosynthetic protein FliP signature	IPR005837	Flagellar transport protein FliP	107	119	6.9E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.