Pseudomonas mendocina NK-01, MDS_4790
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR43849 | BLL3936 PROTEIN | - | - | 8 | 722 | 0.0 |
| NCBIfam | TIGR02123 | JCVI: TRAP transporter fused permease subunit | IPR011853 | TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ | 27 | 720 | 0.0 |
| Pfam | PF11874 | Domain of unknown function (DUF3394) | IPR021814 | Protein of unknown function DUF3394 | 670 | 846 | 2.7E-70 |
| Pfam | PF06808 | Tripartite ATP-independent periplasmic transporter, DctM component | IPR010656 | TRAP C4-dicarboxylate transport system permease DctM subunit | 134 | 664 | 3.3E-77 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.