Pseudomonas syringae pv. tomato DC3000, PSPTO_1164

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	166	182	8.7E-12
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	118	221	1.96806E-43
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	108	223	2.22E-37
FunFam	G3DSA:3.30.1330.60:FF:000008	Outer membrane protein OmpA	-	-	84	225	4.6E-81
Pfam	PF13488	Glycine zipper	IPR039567	Glycine zipper domain	46	90	2.7E-6
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	84	224	2.9E-44
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	151	166	8.7E-12
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	26	223	1.9E-37
Coils	Coil	Coil	-	-	226	229	-
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	120	215	2.5E-23
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	121	143	8.7E-12

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.