Pseudomonas syringae pv. tomato DC3000, PSPTO_2141

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007155 cell adhesion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00691
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0030001 metal ion transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046872 metal ion binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01297
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 86 103 6.1E-8
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 86 105 6.8E-11
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 144 163 6.8E-11
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 42 63 6.8E-11
Pfam PF01297 Zinc-uptake complex component A periplasmic IPR006127 Periplasmic solute binding protein, ZnuA-like 48 310 3.3E-54
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 73 86 6.1E-8
SUPERFAMILY SSF53807 Helical backbone metal receptor - - 41 313 1.86E-66
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 291 309 6.8E-11
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 255 273 6.1E-8
PRINTS PR00690 Adhesin family signature IPR006128 Adhesion lipoprotein 202 223 6.1E-8
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 196 313 2.8E-22
PANTHER PTHR42953 HIGH-AFFINITY ZINC UPTAKE SYSTEM PROTEIN ZNUA-RELATED - - 17 314 4.8E-72
Gene3D G3DSA:3.40.50.1980 Nitrogenase molybdenum iron protein domain - - 41 195 2.0E-37
PRINTS PR00691 Adhesin B signature IPR006129 Adhesin B 67 85 6.8E-11
CDD cd01017 AdcA - - 40 313 4.28788E-122

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.