Pseudomonas syringae pv. tomato DC3000, PSPTO_4853
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Coils | Coil | Coil | - | - | 418 | 418 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 69 | 386 | 2.35E-59 |
| Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 185 | 412 | 2.6E-63 |
| CDD | cd01130 | VirB11-like_ATPase | - | - | 202 | 378 | 8.75826E-68 |
| Gene3D | G3DSA:3.30.450.380 | - | - | - | 19 | 182 | 6.0E-50 |
| PANTHER | PTHR30486 | TWITCHING MOTILITY PROTEIN PILT | - | - | 52 | 395 | 3.0E-91 |
| Pfam | PF00437 | Type II/IV secretion system protein | IPR001482 | Type II/IV secretion system domain | 90 | 364 | 5.7E-79 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.