Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2560 (ribBA1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00926
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009231 riboflavin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00926
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00740 Riboflavin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00925 GTP cyclohydrolase II IPR032677 GTP cyclohydrolase II 211 366 1.7E-28
Gene3D G3DSA:3.40.50.10990 GTP cyclohydrolase II IPR036144 GTP cyclohydrolase II superfamily 207 319 1.4E-19
SUPERFAMILY SSF55821 YrdC/RibB IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily 2 202 3.66E-83
Gene3D G3DSA:3.40.50.10990 GTP cyclohydrolase II IPR036144 GTP cyclohydrolase II superfamily 320 368 1.4E-5
PIRSF PIRSF001259 RibA - - 1 369 2.3E-111
PANTHER PTHR21327 GTP CYCLOHYDROLASE II-RELATED - - 1 366 7.3E-89
Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 1 203 37.303726
NCBIfam TIGR00506 JCVI: 3,4-dihydroxy-2-butanone-4-phosphate synthase IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 3 199 1.1E-69
Gene3D G3DSA:3.90.870.10 DHBP synthase - - 1 206 6.7E-84
SUPERFAMILY SSF142695 RibA-like IPR036144 GTP cyclohydrolase II superfamily 205 367 8.11E-40
FunFam G3DSA:3.90.870.10:FF:000001 Riboflavin biosynthesis protein RibBA - - 1 205 2.4E-92
Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB 7 198 9.2E-78

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.