Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_2668

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003678 DNA helicase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003677 DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR11070
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016787 hydrolase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF13361
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00580 UvrD/REP helicase N-terminal domain IPR014016 UvrD-like helicase, ATP-binding domain 527 609 3.1E-11
Pfam PF13361 UvrD-like helicase C-terminal domain IPR014017 UvrD-like DNA helicase, C-terminal 709 788 1.5E-6
PANTHER PTHR11070 UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER IPR000212 DNA helicase, UvrD/REP type 694 803 8.4E-44
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 620 828 1.0E-22
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 133 792 9.74E-55
Pfam PF00580 UvrD/REP helicase N-terminal domain IPR014016 UvrD-like helicase, ATP-binding domain 135 199 1.4E-5
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 458 614 8.2E-19
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 128 276 1.5E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.