Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4429
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CGCGCCACCTG-N52-CAGGTGGCGCG | 5062304 | 5062377 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CAGGCCATCG-N76-CGATGGCCTG | 5061774 | 5061869 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: GTGGGAGCGA-N86-TCGCTCCCAC | 5061065 | 5061170 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTGTTCGCGAAGG-N40-CCTTCGCGAACAA | 5061093 | 5061158 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GACGATACATCC-N5-GGATGTATCGTC | 5061107 | 5061135 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TCGCTCCCAC-N94-GTGGGAGCGA | 5061161 | 5061274 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCGGTCGCTCCCA-N55-TGGGAGCGACCGG | 5061198 | 5061278 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GTGGGAGCGA-N86-TCGCTCCCAC | 5061265 | 5061370 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTGTTCGCGAA-N44-TTCGCGAACAA | 5061293 | 5061358 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CCGGTCGCTCC-N58-GGAGCGACCGG | 5061398 | 5061477 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TTGTTCGCGAAGG-N40-CCTTCGCGAACAA | 5061492 | 5061557 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: GACGATACATCC-N5-GGATGTATCGTC | 5061506 | 5061534 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |