Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_5143

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02786
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psp00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp00020 Citrate cycle (TCA cycle) 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psp01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.470.20 - - - 1 448 0.0
SUPERFAMILY SSF52440 PreATP-grasp domain IPR016185 Pre-ATP-grasp domain superfamily 1 112 6.26E-45
SUPERFAMILY SSF56059 Glutathione synthetase ATP-binding domain-like - - 82 346 1.77E-66
PANTHER PTHR48095 PYRUVATE CARBOXYLASE SUBUNIT A - - 2 453 0.0
Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain 114 321 2.8E-73
Pfam PF02785 Biotin carboxylase C-terminal domain IPR005482 Biotin carboxylase, C-terminal 334 440 3.9E-40
FunFam G3DSA:3.30.1490.20:FF:000003 acetyl-CoA carboxylase isoform X1 - - 131 201 1.7E-19
SMART SM00878 Biotin_carb_C_2 IPR005482 Biotin carboxylase, C-terminal 334 440 8.0E-60
Pfam PF00289 Biotin carboxylase, N-terminal domain IPR005481 Biotin carboxylase-like, N-terminal domain 1 109 4.9E-43
SUPERFAMILY SSF51246 Rudiment single hybrid motif IPR011054 Rudiment single hybrid motif 329 445 4.6E-42
FunFam G3DSA:3.40.50.20:FF:000010 Propionyl-CoA carboxylase subunit alpha - - 1 130 1.1E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.