Pseudomonas fulva 12-X, Psefu_4347

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00873	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00873	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0022857	transmembrane transporter activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00873	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.20.1640.10	Multidrug efflux transporter AcrB transmembrane domain	-	-	21	504	0.0
Coils	Coil	Coil	-	-	574	594	-
SUPERFAMILY	SSF82866	Multidrug efflux transporter AcrB transmembrane domain	-	-	794	1016	5.49E-44
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	447	470	1.2E-22
Pfam	PF00873	AcrB/AcrD/AcrF family	IPR001036	Acriflavin resistance protein	14	1010	0.0
SUPERFAMILY	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains	-	-	50	145	3.84E-19
SUPERFAMILY	SSF82866	Multidrug efflux transporter AcrB transmembrane domain	-	-	302	498	3.66E-33
PANTHER	PTHR32063	-	IPR001036	Acriflavin resistance protein	12	1023	0.0
Gene3D	G3DSA:3.30.70.1430	Multidrug efflux transporter AcrB pore domain	-	-	562	660	0.0
Gene3D	G3DSA:3.30.70.1430	Multidrug efflux transporter AcrB pore domain	-	-	50	808	0.0
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	48	66	1.2E-22
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	394	418	1.2E-22
Gene3D	G3DSA:3.30.70.1320	Multidrug efflux transporter AcrB pore domain like	-	-	146	335	0.0
SUPERFAMILY	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	195	274	1.16E-10
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	472	495	1.2E-22
SUPERFAMILY	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains	-	-	558	656	2.82E-7
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	340	363	1.2E-22
SUPERFAMILY	SSF82693	Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains	-	-	147	333	2.62E-20
Gene3D	G3DSA:1.20.1640.10	Multidrug efflux transporter AcrB transmembrane domain	-	-	505	1010	0.0
SUPERFAMILY	SSF82714	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	711	795	6.02E-16
Gene3D	G3DSA:3.30.2090.10	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	712	800	0.0
PRINTS	PR00702	Acriflavin resistance protein family signature	IPR001036	Acriflavin resistance protein	20	44	1.2E-22
Gene3D	G3DSA:3.30.2090.10	Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains	IPR027463	Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains	190	282	0.0
Gene3D	G3DSA:3.30.70.1440	Multidrug efflux transporter AcrB pore domain	-	-	661	862	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.