Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a382

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00005
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0031460 glycine betaine transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01186
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba02010 ABC transporters 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd03294 ABC_Pro_Gly_Betaine - - 9 270 0.0
NCBIfam TIGR01186 JCVI: betaine/proline/choline family ABC transporter ATP-binding protein IPR005892 Glycine betaine/proline betaine transport system ATP-binding protein ProV-like 41 271 6.6E-110
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 57 245 4.7E-19
FunFam G3DSA:3.40.50.300:FF:000201 Glycine betaine/L-proline ABC transporter ATP-binding protein - - 36 275 1.3E-112
Pfam PF00005 ABC transporter IPR003439 ABC transporter-like, ATP-binding domain 49 196 1.5E-31
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 37 275 5.8E-74
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 41 271 2.75E-73
PANTHER PTHR43869 GLYCINE BETAINE/PROLINE BETAINE TRANSPORT SYSTEM ATP-BINDING PROTEIN PROV - - 7 271 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.