Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a668

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005886 plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02608
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd19963 PBP1_BMP-like - - 32 310 0.0
Gene3D G3DSA:3.40.50.2300 - - - 135 342 1.6E-129
Pfam PF02608 ABC transporter substrate-binding protein PnrA-like IPR003760 ABC transporter substrate-binding protein PnrA-like 32 295 8.0E-57
PANTHER PTHR43208 ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN - - 10 359 0.0
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 32 225 4.71E-7
SUPERFAMILY SSF53822 Periplasmic binding protein-like I IPR028082 Periplasmic binding protein-like I 168 248 2.04E-7
Gene3D G3DSA:3.40.50.2300 - - - 32 288 1.6E-129

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.