Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2323

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:PR00455	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:1.10.10.60	-	-	-	7	60	3.1E-17
Pfam	PF00440	Bacterial regulatory proteins, tetR family	IPR001647	DNA-binding HTH domain, TetR-type	23	68	8.1E-12
FunFam	G3DSA:1.10.357.10:FF:000035	Transcriptional repressor PhlF	-	-	61	195	6.3E-82
PANTHER	PTHR30055	HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR	-	-	7	197	1.3E-18
SUPERFAMILY	SSF46689	Homeodomain-like	IPR009057	Homeobox-like domain superfamily	14	77	1.75E-14
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	22	35	2.2E-6
PRINTS	PR00455	TetR bacterial regulatory protein HTH signature	IPR001647	DNA-binding HTH domain, TetR-type	43	66	2.2E-6
Gene3D	G3DSA:1.10.357.10	Tetracycline Repressor, domain 2	-	-	61	195	1.2E-23
Pfam	PF16859	Tetracyclin repressor-like, C-terminal domain	IPR011075	Tetracyclin repressor-like, C-terminal domain	80	182	1.0E-20
SUPERFAMILY	SSF48498	Tetracyclin repressor-like, C-terminal domain	IPR036271	Tetracyclin repressor-like, C-terminal domain superfamily	80	197	8.58E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.