Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2561

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006526 arginine biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01851
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003942 N-acetyl-gamma-glutamyl-phosphate reductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01851
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00859
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0051287 NAD binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00859
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01851
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba00220 Arginine biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pba01210 2-Oxocarboxylic acid metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.40.50.720 - - - 5 126 3.6E-19
PANTHER PTHR32338 N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED - - 52 312 2.4E-45
Gene3D G3DSA:3.30.360.10 Dihydrodipicolinate Reductase; domain 2 - - 127 299 2.9E-37
Hamap MF_01110 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 8 314 49.99305
Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain IPR000534 Semialdehyde dehydrogenase, NAD-binding 51 110 4.9E-12
SUPERFAMILY SSF55347 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain - - 123 295 2.22E-34
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 12 144 2.09E-29
NCBIfam TIGR01851 JCVI: N-acetyl-gamma-glutamyl-phosphate reductase IPR010136 N-acetyl-gamma-glutamyl-phosphate reductase, type 2 10 312 9.8E-120
SMART SM00859 Semialdhyde_dh_3 IPR000534 Semialdehyde dehydrogenase, NAD-binding 11 112 2.4E-15

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.