Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a2837
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0042398 | cellular modified amino acid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF04107
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0004357 | glutamate-cysteine ligase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF04107
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0016879 | ligase activity, forming carbon-nitrogen bonds |
Inferred from Sequence Model
Term mapped from: InterPro:MF_01609
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0003824 | catalytic activity |
Inferred from Sequence Model
Term mapped from: InterPro:SSF55931
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | ergothioneine biosynthesis I (bacteria) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | ophthalmate biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| MetaCyc | homoglutathione biosynthesis | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF55931 | Glutamine synthetase/guanido kinase | IPR014746 | Glutamine synthetase/guanido kinase, catalytic domain | 3 | 360 | 1.08E-87 |
| Pfam | PF04107 | Glutamate-cysteine ligase family 2(GCS2) | IPR006336 | Glutamate--cysteine ligase, GCS2 | 7 | 285 | 9.5E-61 |
| Hamap | MF_01609 | Glutamate--cysteine ligase [gshA]. | IPR011793 | Putative glutamate--cysteine ligase YbdK | 1 | 387 | 74.211159 |
| PANTHER | PTHR36510 | GLUTAMATE--CYSTEINE LIGASE 2-RELATED | - | - | 4 | 371 | 4.1E-88 |
| Gene3D | G3DSA:3.30.590.20 | - | - | - | 1 | 365 | 4.7E-94 |
| NCBIfam | TIGR02050 | JCVI: YbdK family carboxylate-amine ligase | IPR011793 | Putative glutamate--cysteine ligase YbdK | 7 | 291 | 8.0E-93 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.