Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3764
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF035859
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pba02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | - | - | 531 | 564 | - |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 71 | 520 | 3.71E-58 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 89 | 468 | 1.1E-41 |
| PANTHER | PTHR43649 | ARABINOSE-BINDING PROTEIN-RELATED | - | - | 12 | 487 | 3.7E-22 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 192 | 510 | 1.1E-41 |
| PIRSF | PIRSF035859 | ABC_tp_sb | IPR014597 | ABC transporter, periplasmic substrate-binding protein, predicted | 1 | 580 | 0.0 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.