Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a3957

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006099 tricarboxylic acid cycle
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00285
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01800
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF48256
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pba00640 Propanoate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR11739 CITRATE SYNTHASE IPR002020 Citrate synthase 10 374 1.9E-99
PIRSF PIRSF001369 Citrate_synth IPR024176 Citrate synthase, bacterial-type 3 375 4.2E-120
FunFam G3DSA:1.10.230.10:FF:000003 Citrate synthase - - 224 322 1.7E-37
CDD cd06108 Ec2MCS_like - - 10 372 0.0
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 251 271 2.1E-40
SUPERFAMILY SSF48256 Citrate synthase IPR036969 Citrate synthase superfamily 10 375 4.97E-129
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 126 139 2.1E-40
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 308 324 2.1E-40
Gene3D G3DSA:1.10.230.10 - IPR016143 Citrate synthase-like, small alpha subdomain 224 325 0.0
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 328 342 2.1E-40
Gene3D G3DSA:1.10.580.10 Citrate Synthase, domain 1 IPR016142 Citrate synthase-like, large alpha subdomain 22 347 0.0
NCBIfam TIGR01800 JCVI: 2-methylcitrate synthase/citrate synthase II IPR011278 2-methylcitrate synthase/citrate synthase type I 11 375 0.0
Pfam PF00285 Citrate synthase, C-terminal domain IPR002020 Citrate synthase 11 357 1.0E-119
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 198 226 2.1E-40
PRINTS PR00143 Citrate synthase signature IPR002020 Citrate synthase 176 191 2.1E-40

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.