Pseudomonas brassicacearum subsp. brassicacearum NFM421, PSEBR_a4248
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54001 | Cysteine proteinases | IPR038765 | Papain-like cysteine peptidase superfamily | 37 | 170 | 7.11E-41 |
| Pfam | PF00877 | NlpC/P60 family | IPR000064 | Endopeptidase, NLPC/P60 domain | 58 | 166 | 1.7E-29 |
| Gene3D | G3DSA:3.90.1720.10 | endopeptidase domain like (from Nostoc punctiforme) | - | - | 11 | 164 | 2.3E-41 |
| PANTHER | PTHR47053 | MUREIN DD-ENDOPEPTIDASE MEPH-RELATED | - | - | 43 | 171 | 1.3E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.