Pseudomonas sp. UW4, PputUW4_00852 (cyoB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02843
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009060 aerobic respiration
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10422
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc aerobic respiration I (cytochrome c) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
KEGG ppuu00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
MetaCyc pyruvate to cytochrome <i>bo</i> oxidase electron transfer InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc Fe(II) oxidation InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc aerobic respiration II (cytochrome c) (yeast) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion
MetaCyc arsenite oxidation I (respiratory) InterPro 5.36-75.0 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 124 148 4.1E-93
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 324 339 4.1E-93
Gene3D G3DSA:1.20.210.10 - IPR036927 Cytochrome c oxidase-like, subunit I superfamily 52 554 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 97 120 4.1E-93
SUPERFAMILY SSF81442 Cytochrome c oxidase subunit I-like IPR036927 Cytochrome c oxidase-like, subunit I superfamily 51 591 0.0
FunFam G3DSA:1.20.210.10:FF:000002 Cytochrome o ubiquinol oxidase, subunit I - - 52 554 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 383 401 4.1E-93
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 411 430 4.1E-93
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 47 72 4.1E-93
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 227 246 4.1E-93
NCBIfam TIGR02843 JCVI: cytochrome o ubiquinol oxidase subunit I IPR014207 Cytochrome o ubiquinol oxidase, subunit I 2 649 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 461 482 4.1E-93
CDD cd01662 Ubiquinol_Oxidase_I - - 48 554 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 278 299 4.1E-93
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 166 178 4.1E-93
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 348 369 4.1E-93
Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I IPR000883 Cytochrome c oxidase subunit I 56 504 1.6E-129
PANTHER PTHR10422 CYTOCHROME C OXIDASE SUBUNIT 1 IPR000883 Cytochrome c oxidase subunit I 45 562 0.0
PRINTS PR01165 Cytochrome c oxidase subunit I signature IPR000883 Cytochrome c oxidase subunit I 198 216 4.1E-93

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.