Pseudomonas sp. UW4, PputUW4_01135
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CATCGCGGGCAAGCC-N64-GGCTTGCCCGCGATG | 1340787 | 1340880 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: CGCTCCCACA-N43-TGTGGGAGCG | 1340802 | 1340864 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Motifs annotated in this feature
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: CAGGGCCTGG-N37-CCAGGCCCTG | 1340512 | 1340568 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| Inverted repeat: AAGCTGTTCAGC-N86-GCTGAACAGCTT | 1339644 | 1339753 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: TGTAGGAGCGAGCCTGCTCGCGA-N54-TCGCGAGCAGGCTCGCTCCTACA | 1339840 | 1339939 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Inverted repeat: AAGCCCGCATGAC-N8-GTCATGCGGGCTT | 1339962 | 1339995 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 316 | 1339964 | 1339993 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 317 | 1339964 | 1339993 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |