Pseudomonas sp. UW4, PputUW4_02797

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0019867	outer membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01414	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR01484	Pertactin virulence factor family signature	IPR003991	Pertactin virulence factor family	733	750	1.1E-5
PRINTS	PR01484	Pertactin virulence factor family signature	IPR003991	Pertactin virulence factor family	779	800	1.1E-5
SMART	SM00869	Autotransporter_2	IPR005546	Autotransporter beta-domain	591	852	5.1E-38
CDD	cd01344	PL2_Passenger_AT	IPR043990	Autochaperone domain type 1	317	485	2.23164E-37
Gene3D	G3DSA:2.160.20.160	-	-	-	28	157	1.6E-9
Gene3D	G3DSA:2.160.20.20	-	IPR012332	Autotransporter, pectate lyase C-like domain superfamily	158	485	1.4E-21
SUPERFAMILY	SSF51126	Pectin lyase-like	IPR011050	Pectin lyase fold/virulence factor	49	488	1.48E-32
SUPERFAMILY	SSF103515	Autotransporter	IPR036709	Autotransporter beta-domain superfamily	562	865	2.88E-40
PRINTS	PR01484	Pertactin virulence factor family signature	IPR003991	Pertactin virulence factor family	818	843	1.1E-5
Gene3D	G3DSA:2.40.128.130	-	IPR036709	Autotransporter beta-domain superfamily	549	865	1.5E-70
Pfam	PF18883	Autochaperone Domain Type 1	IPR043990	Autochaperone domain type 1	355	467	1.9E-27
Pfam	PF03797	Autotransporter beta-domain	IPR005546	Autotransporter beta-domain	595	842	4.4E-45
NCBIfam	TIGR01414	JCVI: outer membrane autotransporter barrel domain	IPR006315	Outer membrane autotransporter barrel domain	373	865	4.0E-67

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.