Pseudomonas sp. UW4, PputUW4_03073 (tssJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 IPR017734 Type VI secretion system, lipoprotein SciN 45 168 1.9E-27
Gene3D G3DSA:2.60.40.4150 Type VI secretion system, lipoprotein SciN IPR038706 Type VI secretion protein SciN-like superfamily 42 177 2.4E-34
PANTHER PTHR37625 OUTER MEMBRANE LIPOPROTEIN-RELATED IPR017734 Type VI secretion system, lipoprotein SciN 8 174 2.3E-29
NCBIfam TIGR03352 JCVI: type VI secretion system lipoprotein TssJ IPR017734 Type VI secretion system, lipoprotein SciN 9 155 1.2E-21

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.