Pseudomonas sp. UW4, PputUW4_03077 (tssM)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | ppuu03070 | Bacterial secretion system | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | ppuu02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF06744 | Type VI secretion protein IcmF C2-like domain | IPR010623 | Type VI secretion system IcmF, C-terminal | 988 | 1088 | 3.0E-17 |
| PANTHER | PTHR36153 | INNER MEMBRANE PROTEIN-RELATED | - | - | 122 | 1108 | 0.0 |
| Pfam | PF06761 | Intracellular multiplication and human macrophage-killing | IPR009612 | IcmF-related | 411 | 725 | 1.1E-67 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.