Pseudomonas sp. UW4, PputUW4_03254 (xylL)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppuu00622	Xylene degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuu01220	Degradation of aromatic compounds	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuu01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuu01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuu00362	Benzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppuu00364	Fluorobenzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	80	91	1.3E-37
PRINTS	PR00080	Short-chain dehydrogenase/reductase (SDR) superfamily signature	IPR002347	Short-chain dehydrogenase/reductase SDR	152	171	1.3E-10
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	128	144	1.3E-37
PRINTS	PR00080	Short-chain dehydrogenase/reductase (SDR) superfamily signature	IPR002347	Short-chain dehydrogenase/reductase SDR	134	142	1.3E-10
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	179	201	-
Gene3D	G3DSA:3.40.50.720	-	-	-	1	256	1.1E-66
PANTHER	PTHR42760	SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER	-	-	3	254	2.2E-55
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	8	25	1.3E-37
FunFam	G3DSA:3.40.50.720:FF:000084	Short-chain dehydrogenase reductase	-	-	1	256	5.5E-62
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	152	171	1.3E-37
CDD	cd08937	DHB_DH-like_SDR_c	-	-	3	257	0.0
NCBIfam	NF040811	NCBIFAM: benzoate diol dehydrogenase BenD	IPR047686	Benzoate diol dehydrogenase BenD	3	257	0.0
SMART	SM00822	This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.	-	-	7	185	0.0037
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	173	190	1.3E-37
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	219	239	1.3E-37
Pfam	PF00106	short chain dehydrogenase	IPR002347	Short-chain dehydrogenase/reductase SDR	7	188	2.0E-51
SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	IPR036291	NAD(P)-binding domain superfamily	6	254	1.66E-66
PRINTS	PR00080	Short-chain dehydrogenase/reductase (SDR) superfamily signature	IPR002347	Short-chain dehydrogenase/reductase SDR	80	91	1.3E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.