Pseudomonas sp. UW4, PputUW4_03864 (fliQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0044780 bacterial-type flagellum assembly
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01402
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0009306 protein secretion
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF004669
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppuu02040 Flagellar assembly 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR34040 FLAGELLAR BIOSYNTHETIC PROTEIN FLIQ IPR002191 Bacterial export protein family 3 1 88 3.6E-26
Pfam PF01313 Bacterial export proteins, family 3 IPR002191 Bacterial export protein family 3 6 77 1.8E-27
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 54 76 1.1E-15
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 18 39 1.1E-15
NCBIfam TIGR01402 JCVI: flagellar biosynthesis protein FliQ IPR006305 Flagellar biosynthesis protein FliQ 1 88 4.1E-26
PRINTS PR00952 Type III secretion system inner membrane Q protein family signature IPR002191 Bacterial export protein family 3 39 54 1.1E-15
PIRSF PIRSF004669 FliQ IPR002191 Bacterial export protein family 3 1 89 3.7E-28

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.