Pseudomonas sp. UW4, PputUW4_04976

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd01949 GGDEF IPR000160 GGDEF domain 243 411 3.94296E-49
TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain IPR000160 GGDEF domain 240 351 5.4E-24
Gene3D G3DSA:3.30.70.270 232 415 9.8E-47
SMART SM00267 IPR000160 GGDEF domain 232 414 2.4E-43
MobiDBLite mobidb-lite consensus disorder prediction 348 373 -
Coils Coil 333 353 -
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 369 409 1.3E-5
SUPERFAMILY SSF55073 IPR029787 Nucleotide cyclase 247 415 8.63E-37
Pfam PF00990 Diguanylate cyclase, GGDEF domain IPR000160 GGDEF domain 242 352 5.3E-23
ProSiteProfiles PS50887 GGDEF domain profile. IPR000160 GGDEF domain 265 416 26.68

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.