Pseudomonas protegens Pf-5, PFL_0106
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0016846 | carbon-sulfur lyase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF04828
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| MetaCyc | formaldehyde oxidation II (glutathione-dependent) | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF04828 | Glutathione-dependent formaldehyde-activating enzyme | IPR006913 | CENP-V/GFA domain | 27 | 113 | 2.8E-19 |
| Gene3D | G3DSA:3.90.1590.10 | - | - | - | 1 | 127 | 2.9E-32 |
| SUPERFAMILY | SSF51316 | Mss4-like | IPR011057 | Mss4-like superfamily | 3 | 130 | 2.3E-42 |
| PANTHER | PTHR33337 | GFA DOMAIN-CONTAINING PROTEIN | - | - | 5 | 127 | 3.2E-26 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.