Pseudomonas protegens Pf-5, PFL_0706

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	ISM Inferred from Sequence Model Term mapped from: InterPro:cd00751	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016746	transferase activity, transferring acyl groups	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF53901	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfl00310	Lysine degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00900	Terpenoid backbone biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00280	Valine, leucine and isoleucine degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00071	Fatty acid degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00630	Glyoxylate and dicarboxylate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00380	Tryptophan metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01212	Fatty acid metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00362	Benzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01200	Carbon metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00620	Pyruvate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00072	Synthesis and degradation of ketone bodies	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00640	Propanoate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl00650	Butanoate metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PANTHER	PTHR42689	ACETYL-COA ACYLTRANSFERASE FADA2 (3-KETOACYL-COA THIOLASE) (BETA-KETOTHIOLASE)-RELATED	-	-	3	425	0.0
PIRSF	PIRSF000429	Ac-CoA_Ac_transf	IPR002155	Thiolase	1	425	3.1E-100
CDD	cd00751	thiolase	IPR002155	Thiolase	8	425	0.0
Pfam	PF00108	Thiolase, N-terminal domain	IPR020616	Thiolase, N-terminal	7	274	4.3E-48
Gene3D	G3DSA:3.40.47.10	-	IPR016039	Thiolase-like	4	425	2.8E-100
Pfam	PF02803	Thiolase, C-terminal domain	IPR020617	Thiolase, C-terminal	284	425	2.7E-29
NCBIfam	TIGR01930	JCVI: acetyl-CoA C-acyltransferase	IPR002155	Thiolase	9	424	8.2E-116
SUPERFAMILY	SSF53901	Thiolase-like	IPR016039	Thiolase-like	287	425	3.46E-28
SUPERFAMILY	SSF53901	Thiolase-like	IPR016039	Thiolase-like	7	282	3.01E-56

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.