Pseudomonas protegens Pf-5, PFL_3361
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| CDD | cd09996 | HDAC_classII_1 | - | - | 10 | 366 | 0.0 |
| PRINTS | PR01270 | Histone deacetylase superfamily signature | IPR000286 | Histone deacetylase family | 263 | 273 | 3.9E-16 |
| Pfam | PF00850 | Histone deacetylase domain | IPR023801 | Histone deacetylase domain | 43 | 328 | 2.5E-81 |
| PRINTS | PR01270 | Histone deacetylase superfamily signature | IPR000286 | Histone deacetylase family | 178 | 193 | 3.9E-16 |
| PANTHER | PTHR48252 | HISTONE DEACETYLASE 2-RELATED | - | - | 42 | 333 | 1.0E-71 |
| Gene3D | G3DSA:3.40.800.20 | Histone deacetylase domain | IPR037138 | Histone deacetylase domain superfamily | 6 | 376 | 0.0 |
| SUPERFAMILY | SSF52768 | Arginase/deacetylase | IPR023696 | Ureohydrolase domain superfamily | 7 | 350 | 1.68E-102 |
| PRINTS | PR01270 | Histone deacetylase superfamily signature | IPR000286 | Histone deacetylase family | 144 | 167 | 3.9E-16 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.