Pseudomonas protegens Pf-5, PFL_4304
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF47781 | RuvA domain 2-like | IPR010994 | RuvA domain 2-like | 38 | 106 | 3.56E-25 |
| Pfam | PF12836 | Helix-hairpin-helix motif | - | - | 44 | 106 | 7.2E-22 |
| PANTHER | PTHR21180 | ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY DOMAIN-CONTAINING PROTEIN 1 | - | - | 35 | 108 | 2.7E-16 |
| Gene3D | G3DSA:1.10.150.280 | - | - | - | 35 | 108 | 1.1E-18 |
| NCBIfam | TIGR00426 | JCVI: competence protein ComEA helix-hairpin-helix repeat region | IPR004509 | Competence protein ComEA, helix-hairpin-helix domain | 44 | 106 | 6.8E-23 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.