Pseudomonas protegens Pf-5, PFL_4372
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0009279 | cell outer membrane |
Inferred from Sequence Model
Term mapped from: InterPro:PF03502
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF111364 | Tsx-like channel | IPR036777 | Nucleoside-specific channel-forming protein, Tsx-like superfamily | 26 | 261 | 5.49E-76 |
| Gene3D | G3DSA:2.40.230.20 | - | IPR036777 | Nucleoside-specific channel-forming protein, Tsx-like superfamily | 24 | 261 | 5.3E-68 |
| Pfam | PF03502 | Nucleoside-specific channel-forming protein, Tsx | IPR018013 | Nucleoside-specific channel-forming protein, Tsx-like | 48 | 261 | 1.2E-11 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.