Pseudomonas protegens Pf-5, PFL_5785 (epd)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	ISM Inferred from Sequence Model Term mapped from: InterPro:PF02800	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0048001	erythrose-4-phosphate dehydrogenase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01532	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0042823	pyridoxal phosphate biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01532	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0051287	NAD binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SM00846	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0005737	cytoplasm	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01532	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pfl00750	Vitamin B6 metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pfl01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:3.40.50.720	-	-	-	8	336	1.8E-115
PRINTS	PR00078	Glyceraldehyde-3-phosphate dehydrogenase signature	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	155	173	7.2E-24
SUPERFAMILY	SSF55347	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	-	-	161	325	4.17E-54
PIRSF	PIRSF000149	GAPDH	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	5	346	2.6E-129
PRINTS	PR00078	Glyceraldehyde-3-phosphate dehydrogenase signature	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	239	256	7.2E-24
Pfam	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain	IPR020828	Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain	8	109	2.1E-33
Pfam	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain	IPR020829	Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain	167	323	1.5E-48
SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	IPR036291	NAD(P)-binding domain superfamily	8	175	4.75E-54
NCBIfam	TIGR01532	JCVI: erythrose-4-phosphate dehydrogenase	IPR006422	D-erythrose-4-phosphate dehydrogenase	8	336	0.0
FunFam	G3DSA:3.40.50.720:FF:000001	Glyceraldehyde-3-phosphate dehydrogenase	-	-	7	171	3.1E-46
PRINTS	PR00078	Glyceraldehyde-3-phosphate dehydrogenase signature	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	280	295	7.2E-24
PRINTS	PR00078	Glyceraldehyde-3-phosphate dehydrogenase signature	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	182	198	7.2E-24
SMART	SM00846	gp_dh_n_7	IPR020828	Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain	7	161	9.7E-74
PANTHER	PTHR43148	GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	7	340	1.9E-112
PRINTS	PR00078	Glyceraldehyde-3-phosphate dehydrogenase signature	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	116	129	7.2E-24
Gene3D	G3DSA:3.30.360.10	Dihydrodipicolinate Reductase; domain 2	-	-	160	326	1.8E-115

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.