Pseudomonas protegens Pf-5, PFL_6085 (fha)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd00060
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF20232 C-terminal domain of Type VI secretion system FHA protein IPR046883 Type VI secretion system, FHA domain-containing protein, C-terminal domain 308 486 9.9E-64
MobiDBLite mobidb-lite consensus disorder prediction - - 164 231 -
Pfam PF00498 FHA domain IPR000253 Forkhead-associated (FHA) domain 30 97 1.7E-13
SUPERFAMILY SSF49879 SMAD/FHA domain IPR008984 SMAD/FHA domain superfamily 14 107 2.3E-21
CDD cd00060 FHA IPR000253 Forkhead-associated (FHA) domain 30 105 1.14571E-15
SMART SM00240 FHA_2 IPR000253 Forkhead-associated (FHA) domain 27 78 0.0024
TIGRFAM TIGR03354 VI_FHA: type VI secretion system FHA domain protein IPR017735 Type VI secretion system, FHA domain-containing protein 3 487 0.0
Gene3D G3DSA:2.60.200.20 - - - 7 111 5.3E-19
MobiDBLite mobidb-lite consensus disorder prediction - - 191 208 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.