Pseudomonas protegens Pf-5, PFL_6158 (accC_1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02786
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00020 Citrate cycle (TCA cycle) 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00620 Pyruvate metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain 114 320 8.4E-73
SMART SM00878 Biotin_carb_C_2 IPR005482 Biotin carboxylase, C-terminal 334 440 1.3E-58
SUPERFAMILY SSF56059 Glutathione synthetase ATP-binding domain-like - - 82 346 7.78E-66
FunFam G3DSA:3.30.1490.20:FF:000003 acetyl-CoA carboxylase isoform X1 - - 131 201 9.1E-19
SUPERFAMILY SSF51246 Rudiment single hybrid motif IPR011054 Rudiment single hybrid motif 329 445 9.94E-42
Pfam PF02785 Biotin carboxylase C-terminal domain IPR005482 Biotin carboxylase, C-terminal 334 440 9.4E-40
PANTHER PTHR48095 PYRUVATE CARBOXYLASE SUBUNIT A - - 2 453 0.0
SUPERFAMILY SSF52440 PreATP-grasp domain IPR016185 Pre-ATP-grasp domain superfamily 1 112 9.35E-45
Pfam PF00289 Biotin carboxylase, N-terminal domain IPR005481 Biotin carboxylase-like, N-terminal domain 1 109 1.0E-42
Gene3D G3DSA:3.30.470.20 - - - 1 448 0.0
FunFam G3DSA:3.40.50.20:FF:000010 Propionyl-CoA carboxylase subunit alpha - - 1 130 3.0E-51

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.