Pseudomonas protegens CHA0, PFLCHA0_c05610 (psd)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0004609 | phosphatidylserine decarboxylase activity |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10067
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0008654 | phospholipid biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PTHR10067
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pprc01100 | Metabolic pathways | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| MetaCyc | phosphatidylserine and phosphatidylethanolamine biosynthesis I | InterPro 5.36-75.0 |
ECO:0000259
match to InterPro signature evidence used in automatic assertion |
||
| KEGG | pprc00564 | Glycerophospholipid metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | pprc01110 | Biosynthesis of secondary metabolites | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF02666 | Phosphatidylserine decarboxylase | IPR003817 | Phosphatidylserine decarboxylase-related | 63 | 282 | 1.6E-61 |
| PANTHER | PTHR10067 | PHOSPHATIDYLSERINE DECARBOXYLASE | IPR003817 | Phosphatidylserine decarboxylase-related | 11 | 283 | 7.8E-75 |
| Hamap | MF_00662 | Phosphatidylserine decarboxylase proenzyme [psd]. | IPR033178 | Phosphatidylserine decarboxylase, prokaryotic type 1 | 10 | 285 | 48.698643 |
| NCBIfam | TIGR00163 | JCVI: archaetidylserine decarboxylase | IPR033177 | Phosphatidylserine decarboxylase, bacterial/eukaryotic | 49 | 283 | 5.8E-79 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.