Pseudomonas protegens CHA0, PFLCHA0_c26090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc00410 beta-Alanine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc00770 Pantothenate and CoA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc00240 Pyrimidine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR43073 DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)] - - 309 405 0.0
FunFam G3DSA:3.30.70.20:FF:000087 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA - - 308 411 3.8E-69
SUPERFAMILY SSF51395 FMN-linked oxidoreductases - - 1 321 2.9E-76
Gene3D G3DSA:3.20.20.70 Aldolase class I IPR013785 Aldolase-type TIM barrel 4 307 9.0E-96
Gene3D G3DSA:3.30.70.20 - - - 308 410 5.1E-26
NCBIfam TIGR01037 JCVI: dihydroorotate dehydrogenase family protein IPR005720 Dihydroorotate dehydrogenase domain 5 320 1.5E-50
FunFam G3DSA:3.20.20.70:FF:000027 Dihydropyrimidine dehydrogenase [NADP(+)] - - 4 311 3.0E-119
CDD cd02940 DHPD_FMN - - 3 301 0.0
Pfam PF01180 Dihydroorotate dehydrogenase IPR005720 Dihydroorotate dehydrogenase domain 7 305 7.7E-28
Pfam PF14697 4Fe-4S dicluster domain - - 338 400 1.2E-22
SUPERFAMILY SSF54862 4Fe-4S ferredoxins - - 321 402 9.07E-13

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.