Pseudomonas protegens CHA0, PFLCHA0_c32680 (fdhE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0005737 | cytoplasm |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF018296
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| FunFam | G3DSA:3.90.1670.10:FF:000001 | Protein FdhE | - | - | 21 | 304 | 2.8E-91 |
| PANTHER | PTHR37689 | PROTEIN FDHE | IPR006452 | Formate dehydrogenase accessory protein | 15 | 302 | 1.3E-83 |
| CDD | cd16341 | FdhE | IPR006452 | Formate dehydrogenase accessory protein | 48 | 289 | 5.97263E-59 |
| Gene3D | G3DSA:3.90.1670.10 | - | IPR024064 | FdhE-like superfamily | 21 | 304 | 1.5E-72 |
| Hamap | MF_00611 | Protein FdhE [fdhE]. | IPR006452 | Formate dehydrogenase accessory protein | 4 | 302 | 39.06778 |
| PIRSF | PIRSF018296 | Format_dh_formtn_FdhE | IPR006452 | Formate dehydrogenase accessory protein | 1 | 304 | 4.5E-105 |
| NCBIfam | TIGR01562 | JCVI: formate dehydrogenase accessory protein FdhE | IPR006452 | Formate dehydrogenase accessory protein | 8 | 301 | 9.4E-91 |
| SUPERFAMILY | SSF144020 | FdhE-like | IPR024064 | FdhE-like superfamily | 22 | 302 | 1.44E-76 |
| Pfam | PF04216 | Protein involved in formate dehydrogenase formation | IPR006452 | Formate dehydrogenase accessory protein | 18 | 300 | 2.0E-99 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.