Pseudomonas protegens CHA0, PFLCHA0_c39130 (xylL)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pprc01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc00622	Xylene degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc00362	Benzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc00364	Fluorobenzoate degradation	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01220	Degradation of aromatic compounds	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	128	144	9.2E-38
MobiDBLite	mobidb-lite	consensus disorder prediction	-	-	179	202	-
PANTHER	PTHR42760	SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER	-	-	3	254	8.2E-55
Gene3D	G3DSA:3.40.50.720	-	-	-	1	256	9.4E-68
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	219	239	9.2E-38
CDD	cd08937	DHB_DH-like_SDR_c	-	-	3	257	0.0
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	80	91	9.2E-38
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	8	25	9.2E-38
SUPERFAMILY	SSF51735	NAD(P)-binding Rossmann-fold domains	IPR036291	NAD(P)-binding domain superfamily	6	254	7.85E-67
Pfam	PF00106	short chain dehydrogenase	IPR002347	Short-chain dehydrogenase/reductase SDR	7	188	3.6E-50
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	152	171	9.2E-38
PRINTS	PR00080	Short-chain dehydrogenase/reductase (SDR) superfamily signature	IPR002347	Short-chain dehydrogenase/reductase SDR	134	142	1.6E-10
FunFam	G3DSA:3.40.50.720:FF:000084	Short-chain dehydrogenase reductase	-	-	1	256	5.1E-62
PRINTS	PR00080	Short-chain dehydrogenase/reductase (SDR) superfamily signature	IPR002347	Short-chain dehydrogenase/reductase SDR	152	171	1.6E-10
PRINTS	PR00080	Short-chain dehydrogenase/reductase (SDR) superfamily signature	IPR002347	Short-chain dehydrogenase/reductase SDR	80	91	1.6E-10
PRINTS	PR00081	Glucose/ribitol dehydrogenase family signature	IPR002347	Short-chain dehydrogenase/reductase SDR	173	190	9.2E-38
NCBIfam	NF040811	NCBIFAM: benzoate diol dehydrogenase BenD	IPR047686	Benzoate diol dehydrogenase BenD	3	257	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.