Pseudomonas protegens CHA0, PFLCHA0_c45140 (purN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00551
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004644 phosphoribosylglycinamide formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00639
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006189 'de novo' IMP biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00639
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc00230 Purine metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
CDD cd08645 FMT_core_GART IPR004607 Phosphoribosylglycinamide formyltransferase 7 188 2.5886E-104
NCBIfam TIGR00639 JCVI: phosphoribosylglycinamide formyltransferase IPR004607 Phosphoribosylglycinamide formyltransferase 7 194 1.6E-74
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 7 206 4.71E-66
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 7 185 6.4E-62
Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. IPR004607 Phosphoribosylglycinamide formyltransferase 6 191 31.58102
Gene3D G3DSA:3.40.50.170 - - - 1 204 1.0E-76
PANTHER PTHR43369 PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE - - 5 201 4.7E-63

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.