Pseudomonas poae RE_1-1-14, H045_03620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00883
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.20.1250.20:FF:000095 Alpha-ketoglutarate permease - - 15 428 0.0
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 240 426 3.3E-18
SUPERFAMILY SSF103473 MFS general substrate transporter IPR036259 MFS transporter superfamily 15 423 6.02E-66
Gene3D G3DSA:1.20.1250.20 MFS general substrate transporter like domains IPR036259 MFS transporter superfamily 11 239 2.1E-37
CDD cd17367 MFS_KgtP - - 20 422 0.0
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 54 380 1.0E-28
PANTHER PTHR43528 ALPHA-KETOGLUTARATE PERMEASE - - 2 425 0.0
NCBIfam TIGR00883 JCVI: metabolite/H+ symporter IPR004736 MFS transporter, metabolite:H symporter 26 415 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.