Pseudomonas poae RE_1-1-14, H045_07665

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 585 603 3.8E-16
CDD cd00130 PAS IPR000014 PAS domain 280 381 1.90596E-12
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 655 772 3.98E-26
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 404 468 7.3E-18
Gene3D G3DSA:1.10.287.130 - - - 401 469 1.2E-23
Pfam PF13426 PAS domain IPR000014 PAS domain 281 383 4.9E-11
Coils Coil Coil - - 384 411 -
CDD cd19410 HK9-like_sensor - - 51 171 1.29064E-14
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 389 469 6.08E-21
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 404 468 2.1E-21
NCBIfam TIGR00229 JCVI: PAS domain S-box protein IPR000014 PAS domain 265 390 6.6E-21
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 457 627 8.64E-44
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 402 464 6.82289E-15
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 520 623 9.40859E-36
Gene3D G3DSA:3.40.50.2300 - - - 653 773 5.7E-27
SUPERFAMILY SSF55785 PYP-like sensor domain (PAS domain) IPR035965 PAS domain superfamily 282 392 4.83E-25
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 654 768 7.4E-24
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 47 178 4.0E-21
Gene3D G3DSA:3.30.450.20 PAS domain - - 265 400 7.4E-29
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 552 566 3.8E-16
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 515 625 5.6E-34
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 656 767 3.5E-18
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 609 622 3.8E-16
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 516 623 2.5E-25
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 470 628 5.0E-40
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 570 580 3.8E-16
PANTHER PTHR43047 TWO-COMPONENT HISTIDINE PROTEIN KINASE - - 208 767 5.2E-104
SMART SM00091 pas_2 IPR000014 PAS domain 269 336 2.0E-4
Gene3D G3DSA:6.10.340.10 - - - 171 264 2.1E-5

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.