Pseudomonas poae RE_1-1-14, H045_08570

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00065
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00448
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00388
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF47384 Homodimeric domain of signal transducing histidine kinase IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily 479 562 2.16E-20
MobiDBLite mobidb-lite consensus disorder prediction - - 438 460 -
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 772 887 2.7E-26
Pfam PF05227 CHASE3 domain IPR007891 CHASE3 46 176 2.2E-33
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 894 1008 2.8E-12
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 894 1021 9.53E-19
Coils Coil Coil - - 610 630 -
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 680 698 1.1E-16
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 896 998 5.6E-14
SUPERFAMILY SSF55781 GAF domain-like - - 220 388 1.62E-24
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 774 880 3.5E-15
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 550 722 1.44E-46
Pfam PF13185 GAF domain IPR003018 GAF domain 253 388 1.7E-15
Gene3D G3DSA:1.10.287.130 - - - 458 559 2.3E-24
Gene3D G3DSA:3.30.450.40 - IPR029016 GAF-like domain superfamily 223 399 1.2E-22
CDD cd00156 REC - - 897 996 4.0244E-14
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 560 722 2.5E-48
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 704 717 1.1E-16
Coils Coil Coil - - 214 234 -
SMART SM00388 HisKA_10 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 493 561 8.5E-19
Gene3D G3DSA:3.40.50.2300 - - - 774 890 2.9E-24
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 663 673 1.1E-16
CDD cd16922 HATPase_EvgS-ArcB-TorS-like - - 613 717 2.76018E-52
Coils Coil Coil - - 98 121 -
MobiDBLite mobidb-lite consensus disorder prediction - - 438 466 -
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 608 720 7.9E-39
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 645 659 1.1E-16
CDD cd19410 HK9-like_sensor - - 49 171 1.15672E-32
Gene3D G3DSA:3.40.50.2300 - - - 1040 1163 3.1E-42
Gene3D G3DSA:3.40.50.2300 - - - 891 1039 3.3E-18
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1040 1154 1.4E-36
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 772 882 1.3E-17
FunFam G3DSA:3.30.565.10:FF:000010 Sensor histidine kinase RcsC - - 560 722 2.7E-48
Pfam PF00512 His Kinase A (phospho-acceptor) domain IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 494 561 3.0E-15
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1042 1154 2.9E-26
Coils Coil Coil - - 389 490 -
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 608 718 2.8E-29
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1037 1159 1.71E-37
SMART SM00065 gaf_1 IPR003018 GAF domain 253 397 1.4E-11
CDD cd00082 HisKA IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain 494 557 4.82443E-13
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1042 1154 3.7595E-40
PANTHER PTHR45339 HYBRID SIGNAL TRANSDUCTION HISTIDINE KINASE J - - 174 954 0.0
Coils Coil Coil - - 875 895 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.