Pseudomonas poae RE_1-1-14, H045_10445

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10280
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0048038 quinone binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10280
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd10280
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppz01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppz01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppz01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppz00400 Phenylalanine, tyrosine and tryptophan biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 347 388 28.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 491 522 45.0
SUPERFAMILY SSF50998 Quinoprotein alcohol dehydrogenase-like IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily 161 786 0.0
Pfam PF01011 PQQ enzyme repeat IPR002372 Pyrrolo-quinoline quinone repeat 447 476 1.5E-7
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 217 249 0.58
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 627 696 290.0
Gene3D G3DSA:2.140.10.10 - - - 154 801 1.9E-127
Pfam PF01011 PQQ enzyme repeat IPR002372 Pyrrolo-quinoline quinone repeat 223 250 5.8E-7
PANTHER PTHR32303 QUINOPROTEIN ALCOHOL DEHYDROGENASE (CYTOCHROME C) - - 143 799 1.1E-53
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 416 466 220.0
CDD cd10280 PQQ_mGDH IPR017511 PQQ-dependent membrane bound dehydrogenase 167 801 0.0
SMART SM00564 ire1_9 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat 724 757 0.024
NCBIfam TIGR03074 JCVI: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family IPR017511 PQQ-dependent membrane bound dehydrogenase 18 802 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.